Information for 8-TGCATACAGT (Motif 12)

A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
Reverse Opposite:
C G T A A G T C A C G T T A C G A G C T C T G A A C G T A C T G A G T C G T C A
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.843
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif56.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets52.3 +/- 28.1bp
Average Position of motif in Background55.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGCATACAGT--
ATTTGCATACAATGG
 A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATACAGT
TNTAATTTGCATANNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATACAGT
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATACAGT
TNTAATTTGCATACNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TGCATACAGT-
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TGCATACAGT
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCATACAGT
ATGMATATDC-
 A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCATACAGT
ATTTGCATA----
 A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCATACAGT
ATTTGCATAT---
 A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCATACAGT
ATTTGCATA----
 A C G T A C G T A C G T A C G T C T A G G T A C G T C A A G C T C T G A A G T C C G T A A C T G G C A T
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T