Information for 5-CKCGCGCCCTCCTCGG (Motif 4)

A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
Reverse Opposite:
A G T C G T A C A T C G C G T A A C T G C T A G C T G A A T C G A C T G A C T G G T A C T A C G A G T C A T C G T G C A A T C G
p-value:1e-11
log p-value:-2.662e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 10.4bp
Average Position of motif in Background55.8 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CKCGCGCCCTCCTCGG
----CCCCCTGCTGTG
 A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CKCGCGCCCTCCTCGG
GCCMCGCCCMCY----
 A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CKCGCGCCCTCCTCGG-
--GGCCYCCTGCTGDGH
 A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CKCGCGCCCTCCTCGG
GGTCCCGCCCCCTTCTC
 A C G T A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

KLF14/MA0740.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CKCGCGCCCTCCTCGG
GGCCACGCCCCCTT---
 A C G T A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CKCGCGCCCTCCTCGG
TCCCCCCCCCCCCCC--
 A C G T A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CKCGCGCCCTCCTCGG
GCCACGCCCCC-----
 A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CKCGCGCCCTCCTCGG
GCCACGCCCCC-----
 A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CKCGCGCCCTCCTCGG--
--NNAGTCCCACTCNNNN
 A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G A C G T A C G T
A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CKCGCGCCCTCCTCGG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A T G C A C G T A T G C T C A G A G T C A C T G G T A C A G T C A T G C A G C T A G T C A G T C A C G T A T G C A C T G A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C