Information for 13-TAAYWTTTTWAMA (Motif 10)

A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G A T C T G A C G T A C G T A G T C A C G A T C T G A C G A T A C G T C G T A
p-value:1e-6
log p-value:-1.574e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.2 +/- 21.0bp
Average Position of motif in Background52.4 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAAYWTTTTWAMA
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAAYWTTTTWAMA
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAAYWTTTTWAMA
NTAATKGTTT----
 A C G T A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAAYWTTTTWAMA----
--ANATTTTTGCAANTN
 A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TAAYWTTTTWAMA---
------TTTGAAACCG
 A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TAAYWTTTTWAMA--
----ATATTTACATA
 A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAAYWTTTTWAMA---
TAAGATTATAATACGG
 A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PROP1/MA0715.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAAYWTTTTWAMA
TAATTAAATTA--
 A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAAYWTTTTWAMA
TAATTNVATTAN-
 A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAYWTTTTWAMA
TTAATGTTTAACC
 A C G T C G T A C G T A A G C T C G T A A C G T A C G T A C G T G A C T C G T A C G T A G T A C C G T A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C