Information for 23-RGGCCAGGCKMGG (Motif 39)

C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T G T A C A C T G A G T C A G T C A C G T A C T G A C T G A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.390e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.1 +/- 30.8bp
Average Position of motif in Background45.7 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:RGGCCAGGCKMGG
----CAGGTGAGG
 C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RGGCCAGGCKMGG
AGGCCTAG-----
 C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RGGCCAGGCKMGG-
GGGGCTYGKCTGGGA
 A C G T C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RGGCCAGGCKMGG
CAGGCCNNGGCCNN
 A C G T C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:RGGCCAGGCKMGG-
------GGCGCGCT
 C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RGGCCAGGCKMGG-
NNGCNCTGCGCGGC
 C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RGGCCAGGCKMGG---
-GGTCANYTGAGGWCA
 C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G A C G T A C G T A C G T
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RGGCCAGGCKMGG
AGGCCTNG-----
 C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:RGGCCAGGCKMGG----------
---YCAGGCWCAGTACCAGGCTC
 C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RGGCCAGGCKMGG
CGTGCCAAG-----
 A C G T C T A G A C T G A C T G A G T C A G T C G T C A A C T G A C T G A G T C A C T G T G C A A C T G A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T