Information for 12-AAAGTTCAAC (Motif 34)

G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C
Reverse Opposite:
A T C G G C A T A C G T A T C G C G T A C G T A A G T C A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.728e+01
Information Content per bp:1.855
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif40.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets31.5 +/- 21.1bp
Average Position of motif in Background45.7 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCAAC--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCAAC--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AAAGTTCAAC
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCAAC--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.70
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTTCAAC
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTTCAAC
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTCAAC
CAAAGGTCAG-
 A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTCAAC--
CAAAGGTCAAGGG
 A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTTCAAC
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AAAGTTCAAC
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A T G C A A C T G A C G T A C G T A T G C C G T A C G T A A T G C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T