Information for 20-GCAGGGGGCRGAA (Motif 32)

A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C A G C T C T A G A G T C A G T C A G T C G T A C A G T C A C G T A T C G A G T C
p-value:1e-7
log p-value:-1.741e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 33.8bp
Average Position of motif in Background57.0 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGGGGCRGAA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCAGGGGGCRGAA-
--RGKGGGCGGAGC
 A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCAGGGGGCRGAA-
GGCGGGGGCGGGGG
 A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGGGCRGAA-
GGGNGGGGGCGGGGC
 A C G T A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCAGGGGGCRGAA
TGTCAGGGGGCG---
 A C G T A C G T A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGGGGCRGAA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGGGGCRGAA
ANTGCGGGGGCGGN-
 A C G T A C G T A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCAGGGGGCRGAA-
---GGGGGCGGGGC
 A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGGGGGCRGAA---
--AGGGGGCGGGGCTG
 A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCAGGGGGCRGAA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C T G C G T A G T C A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A