Information for 21-TTGCTATACTTCCCAC (Motif 28)

A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C
Reverse Opposite:
T A C G C G A T C T A G A T C G T A C G T C G A C T G A A C T G A C G T C T G A A C G T C G T A A T C G T G A C T C G A C T G A
p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.688
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.7 +/- 11.6bp
Average Position of motif in Background53.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TTGCTATACTTCCCAC-
-------HTTTCCCASG
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTGCTATACTTCCCAC
-----NNACTTGCCTT
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTGCTATACTTCCCAC----
---NNNTCCATCCCATAANN
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTGCTATACTTCCCAC
--ACTACAATTCCC--
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:TTGCTATACTTCCCAC--
-------NCTTCCCGCCC
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TTGCTATACTTCCCAC
-------GCTTCC---
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:TTGCTATACTTCCCAC-
-------NYTTCCCGCC
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TTGCTATACTTCCCAC-
-------ATTTTCCATT
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TTGCTATACTTCCCAC-
-------ATTTTCCATT
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:TTGCTATACTTCCCAC
--------CTTGGCAA
 A G C T A G C T A C T G A T G C C G A T T G C A G A C T G T C A A G T C A G C T A C G T A T G C A T G C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A