Information for 17-TCACACGCTGTTAGGG (Motif 23)

A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
Reverse Opposite:
A T G C G T A C A G T C A C G T G T C A C G T A A G T C C G T A A C T G A G T C C T A G A C G T A C T G A C G T C T A G C G T A
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.883
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 10.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCACACGCTGTTAGGG--
-AGGACGCTGTAAAGGGA
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G A C G T A C G T
A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCACACGCTGTTAGGG
---CCTGCTGAGH---
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCACACGCTGTTAGGG--
-AAGACGCTGTAAAGCGA
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCACACGCTGTTAGGG--
-AAGACGCTGTAAAGCGA
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCACACGCTGTTAGGG
TCNCCTGCTGNGNNN-
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCACACGCTGTTAGGG
TNTCCTGCTGTGNNG-
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCACACGCTGTTAGGG
NNTCCTGCTGTGNNN-
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCACACGCTGTTAGGG
---CACGCA-------
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCACACGCTGTTAGGG
------GCTGTG----
 A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCACACGCTGTTAGGG
GTCACATGAY-------
 A C G T A C G T A G T C G T C A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T G T C A C T A G A C T G A T C G
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T