Information for 10-CMTAGTTGGC (Motif 20)

A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C
Reverse Opposite:
A C T G G T A C G T A C C G T A C G T A T G A C A C G T C T G A A C G T A C T G
p-value:1e-8
log p-value:-2.048e+01
Information Content per bp:1.769
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif96.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets39.8 +/- 26.2bp
Average Position of motif in Background46.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CMTAGTTGGC-
CCATATATGGNA
 A C G T A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CMTAGTTGGC---
----NTTGGCANN
 A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CMTAGTTGGC-
-----TTGGCA
 A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CMTAGTTGGC---
---NNTTGGCANN
 A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CMTAGTTGGC
-NTAATTGG-
 A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T

Nobox/MA0125.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CMTAGTTGGC
--TAATTGGT
 A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C
A C G T A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CMTAGTTGGC----
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CMTAGTTGGC-
TTCCATATATGGAA
 A C G T A C G T A C G T A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CMTAGTTGGC
-NTAATTGN-
 A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C
A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T

HESX1/MA0894.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CMTAGTTGGC
GCTAATTGGC
 A G T C G T C A A G C T C G T A A C T G G C A T C G A T A C T G C A T G A G T C
T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C