Information for 16-TGHCCCAAGCTCAGGG (Motif 19)

A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
Reverse Opposite:
A T G C G A T C G T A C C G A T A C T G C G T A C T A G A G T C C G A T A C G T A T C G A C T G A C T G C A G T G T A C C G T A
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.688
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif74.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets42.0 +/- 21.5bp
Average Position of motif in Background49.2 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG
----CAAAGGTCAG--
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.59
Offset:8
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG
--------GCTCCG--
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG---
-------AGGTCAAGGTCA
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGHCCCAAGCTCAGGG
----TCAAGGTCAN--
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG--
-TATTCAAGGTCATGCGA
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TGHCCCAAGCTCAGGG
-------NGCTN----
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG---
-------AGGTCAAGGTCA
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG
----TCAAGGTCAT--
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG
---BTCAAGGTCA---
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGHCCCAAGCTCAGGG
----TCAAGGTCATA-
 A C G T A C T G G T C A A G T C A G T C T A G C G T C A C G T A A C T G A G T C A C G T A G T C G C T A A C T G C A T G A T C G
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T