Information for 19-ACGTGCCAGGCCC (Motif 39)

C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G A G T C A G T C A C G T C T A G A C T G A G T C C G T A A G T C A C T G A G C T
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 22.2bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ACGTGCCAGGCCC
-----CTAGGCCT
 C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACGTGCCAGGCCC
TACGTGCV------
 A C G T C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACGTGCCAGGCCC-----
---GACCACGCCCTTATT
 C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCCAGGCCC
RTACGTGC-------
 A C G T A C G T C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACGTGCCAGGCCC----
---GGCCACGCCCCCTT
 C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ACGTGCCAGGCCC
-----CNAGGCCT
 C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACGTGCCAGGCCC
CGGCACGTGCCA-----
 A C G T A C G T A C G T A C G T C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACGTGCCAGGCCC
TGGCACGTGCCA-----
 A C G T A C G T A C G T A C G T C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCCAGGCCC
GGACGTGC-------
 A C G T A C G T C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACGTGCCAGGCCC-------
--ATGCCACGCCCCTTTTTG
 C T G A A G T C A C T G A C G T C T A G A G T C A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G