Information for 9-AGCCACTAYA (Motif 36)

C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A
Reverse Opposite:
A C G T C T G A A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C G T
p-value:1e-7
log p-value:-1.827e+01
Information Content per bp:1.816
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif72.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets49.4 +/- 25.0bp
Average Position of motif in Background53.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGCCACTAYA----
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCCACTAYA----
TAAGCCACTTGAAATT
 A C G T A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCACTAYA
CAGCC------
 A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCCACTAYA----
TAAGCCACTTGAAATT
 A C G T A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCACTAYA
AAACMATTAN-
 A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCCACTAYA----
TAAGCCACTTGAATTT
 A C G T A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCCACTAYA----
TAAGCCACTTAACATT
 A C G T A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCCACTAYA
ACTAGCCAATCA-
 A C G T A C G T A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCACTAYA
AAACCACANN-
 A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCACTAYA-----
AACCCAATAAAATTCG
 A C G T C G T A C T A G A G T C A G T C T G C A G T A C A C G T C G T A A G C T G T C A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G