Information for 11-CWGCTGASAGASAKGA (Motif 26)

A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
Reverse Opposite:
C G A T G A T C G T A C A C G T A T C G C G A T A T G C A C G T T A C G A G C T A T G C G C T A A C T G A T G C C G A T A C T G
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.772
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.8 +/- 12.5bp
Average Position of motif in Background32.7 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CWGCTGASAGASAKGA
-AGGTGNCAGACAG--
 A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CWGCTGASAGASAKGA
ANCAGCTG----------
 A C G T A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CWGCTGASAGASAKGA
NAHCAGCTGD---------
 A C G T A C G T A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CWGCTGASAGASAKGA
GGTGYTGACAGS-----
 A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CWGCTGASAGASAKGA
-AGGTGHCAGACA---
 A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CWGCTGASAGASAKGA
AACAGCTG----------
 A C G T A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CWGCTGASAGASAKGA
CAGCAGCTGN---------
 A C G T A C G T A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CWGCTGASAGASAKGA
NAACAGCTGG---------
 A C G T A C G T A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CWGCTGASAGASAKGA
AATTTGCTGAC--------
 A C G T A C G T A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CWGCTGASAGASAKGA
NVCAGCTGBBNN------
 A C G T A C G T A G T C C G T A A T C G G T A C C G A T A T C G C T G A A T G C G T C A A T C G G C T A A T G C C G T A A C T G C T A G C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T