Information for 5-TGGCCTGCTG (Motif 19)

A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G
Reverse Opposite:
G A T C G C T A A T C G T G A C G T C A A C T G A T C G G A T C G A T C T C G A
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.647
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif3043.9
Percentage of Background Sequences with motif6.64%
Average Position of motif in Targets49.8 +/- 25.7bp
Average Position of motif in Background50.2 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGCTG-----
TNTCCTGCTGTGNNG
 A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGCTG-----
TCNCCTGCTGNGNNN
 A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGCTG-----
NNTCCTGCTGTGNNN
 A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TGGCCTGCTG---
---CCTGCTGAGH
 A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGCCTGCTG--
CCCCCTGCTGTG
 A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTGCTG---
TTGGCATGGTGCCA
 A C G T A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G A C G T A C G T A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGCCTGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGCCTGCTG
-GGCGCGCT-
 A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TGGCCTGCTG
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCCTGCTG
ATGGGGTGAT-
 A C G T A G C T C T A G C T A G A T G C T G A C C A G T A C T G T A G C C G A T C T A G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T