Information for 9-CTGTGGCCAGCYGCCA (Motif 5)

G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G C T A G A T G C C T A G T A C G G T A C A C G T A C T G T C A G A T G C A G T C C G T A A G T C C T G A A C T G
p-value:1e-15
log p-value:-3.456e+01
Information Content per bp:1.762
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.1 +/- 23.7bp
Average Position of motif in Background47.9 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGTGGCCAGCYGCCA
--TTGGCATGGTGCCA
 G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGTGGCCAGCYGCCA
GARTGGTCATCGCCC-
 G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGTGGCCAGCYGCCA
--CTGGCAGNCTGCCA
 G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGCCAGCYGCCA
NNHTGTGGTTWN------
 A C G T A C G T G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCCAGCYGCCA
GCTGTGGTTT-------
 A C G T G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGTGGCCAGCYGCCA--
--TTGGCANNNTGCCAAG
 G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGCCAGCYGCCA
GTCTGTGGTTT-------
 A C G T A C G T G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGTGGCCAGCYGCCA
CTGTGGTTTN------
 G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGTGGCCAGCYGCCA
TCACCTCTGGGCAG------
 A C G T A C G T A C G T A C G T G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCCAGCYGCCA
GCTGTG-----------
 A C G T G T A C G A C T A C T G A C G T C T A G A T C G A G T C G T A C C G T A A C T G A T G C A G T C T A C G A G T C A G T C C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T