Information for 25-TYTWTARAGCCKC (Motif 32)

A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G G T A C A C T G A C T G A G T C A C G T A G C T A C G T G T C A C G A T C G T A C T A G C G T A
p-value:1e-5
log p-value:-1.232e+01
Information Content per bp:1.878
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.4 +/- 19.5bp
Average Position of motif in Background76.8 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TYTWTARAGCCKC
CCTTTTATAGNC--
 A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TYTWTARAGCCKC--
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TYTWTARAGCCKC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TYTWTARAGCCKC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TYTWTARAGCCKC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TYTWTARAGCCKC
------CAGCC--
 A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TYTWTARAGCCKC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TYTWTARAGCCKC
--TTTGAAACCG-
 A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TYTWTARAGCCKC
GRTGMTRGAGCC--
 A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TYTWTARAGCCKC
GCTATTTATAGC---
 A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A C T G A C G T A A C T G A G T C A G T C A C T G A G T C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T A C G T