Information for 4-CCRGCTSAMMGCG (Motif 9)

A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C A G T A C T G A G C T A T C G C G T A A C T G A G T C G A C T A C T G A C T G
p-value:1e-11
log p-value:-2.759e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 25.7bp
Average Position of motif in Background34.4 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCRGCTSAMMGCG
NAHCAGCTGD-----
 A C G T A C G T A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCRGCTSAMMGCG
--NGCTN------
 A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCRGCTSAMMGCG
CCAGCTGTTN---
 A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCRGCTSAMMGCG
ANCAGCTG------
 A C G T A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCRGCTSAMMGCG
CCTGCTGAGH---
 A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCRGCTSAMMGCG
AACAGCTGAT----
 A C G T A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCRGCTSAMMGCG
CAGCAGCTGN-----
 A C G T A C G T A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCRGCTSAMMGCG
AACAGCTG------
 A C G T A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CCRGCTSAMMGCG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCRGCTSAMMGCG
GGTGYTGACAGS-
 A G T C A G T C C T G A A C T G A G T C A C G T A T G C C T G A G T A C G T C A A C T G A G T C A C T G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T