Information for 17-CAGTTGCTCT (Motif 48)

A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.208e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.4 +/- 28.8bp
Average Position of motif in Background60.2 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGTTGCTCT
CACTTCCTCT
 A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAGTTGCTCT--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CAGTTGCTCT
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTGCTCT
AGCAGCTGCT--
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTTGCTCT
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAGTTGCTCT
NNVVCAGCTGBN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGTTGCTCT
AGCAGCTGCTNN
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAGTTGCTCT
TGGCAGTTGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGTTGCTCT--
CACTTCCYCTTT
 A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTGCTCT
NNCAGGTGTN--
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C G T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T