Information for 12-GGAATTTCCA (Motif 44)

C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G C T G A C G T A T G C A A G C T A C G T A T G C A G T C
p-value:1e-6
log p-value:-1.536e+01
Information Content per bp:1.837
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif133.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets45.1 +/- 24.9bp
Average Position of motif in Background48.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCCA
GGGAATTTCC-
 A C G T C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCA
GGGAATTTCC-
 A C G T C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCA
GGGGATTTCC-
 A C G T C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GGAATTTCCA
NGGGGATTTCCC
 A C G T A C G T C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCA
GGGGATTTCC-
 A C G T C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGAATTTCCA--
--ATTTTCCATT
 C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A A C G T A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGAATTTCCA--
--ATTTTCCATT
 C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGAATTTCCA--
--ATTTTCCATT
 C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A A C G T A C G T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGAATTTCCA--
--ATTTTCCATT
 C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGAATTTCCA
---TTTTCCA
 C T A G T A C G C G T A C T G A A C G T A C G T A G C T T G A C A G T C G T C A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A