Information for 10-ATGTTADTKC (Motif 39)

G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C
Reverse Opposite:
A T C G T G A C C G T A G C T A A G C T G T C A C T G A A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.774
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif432.7
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets54.2 +/- 27.2bp
Average Position of motif in Background47.6 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATGTTADTKC-
TATGCWAATBAV
 A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTADTKC-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTADTKC-
AGGGAAGTCATTTCT
 A C G T A C G T A C G T A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTTADTKC
TATGCAAAT--
 A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGTTADTKC
TTATGCAAATTA
 A C G T A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGTTADTKC
TATGCAAAT--
 A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGTTADTKC
TTATGCAAATTA
 A C G T A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATGTTADTKC-----
AATCGTTAATCCCTTTA
 A C G T A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATGTTADTKC
AATATGCAAATT-
 A C G T A C G T A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGTTADTKC------
ATAGTTAATCCCCCNNA
 A C G T G T C A C G A T A C T G G A C T A C G T C T G A C G A T C G A T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A