Information for 16-AAMAGRMACCAGA (Motif 37)

T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A
Reverse Opposite:
C G A T G T A C A C G T A C T G A C T G C G A T A C G T A G C T G A T C C G A T A C T G A C G T A G C T
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.637
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif407.0
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets55.7 +/- 25.0bp
Average Position of motif in Background51.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAMAGRMACCAGA-
TGACANARRCCAGRC
 A C G T T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AAMAGRMACCAGA--
-----ATGCCAGACN
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAMAGRMACCAGA--
---AGGAAACAGCTG
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAMAGRMACCAGA-------
---CAAATCCAGACATCACA
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:AAMAGRMACCAGA-----
--------CCAGACRSVB
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:AAMAGRMACCAGA---
--------CCAGACAG
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AAMAGRMACCAGA
-------CACAGN
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAMAGRMACCAGA-
---AAACCACAGAN
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAMAGRMACCAGA-
CAAAAGTAAACAAAG
 A C G T T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAMAGRMACCAGA
----GTAAACAG-
 T C G A T G C A T G A C C G T A C T A G T C G A T G C A G C T A T G A C G T A C G T C A A C T G C G T A
A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T