Information for 6-GTGACAAGGG (Motif 30)

A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
Reverse Opposite:
A T G C A T G C G A T C A G C T A C G T C T A G A C G T A T G C G T C A A G T C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.831
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif145.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets43.5 +/- 22.8bp
Average Position of motif in Background55.3 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTGACAAGGG---
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTGACAAGGG
--AACAAAGG
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTGACAAGGG
--RACAAWGG
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTGACAAGGG
TTGACAGG--
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGACAAGGG
VRRACAAWGG
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGACAAGGG
TTGACAG---
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGACAAGGG
CAGATAAGGN
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGACAAGGG
RHTGWCAR---
 A C G T A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTGACAAGGG
---ACAAAG-
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGACAAGGG
NAGATAAGNN
 A C T G C A G T A T C G T G C A G A T C C G T A C T G A C T A G T A C G A T C G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A