Information for 17-TYCATGCATCACTTCN (Motif 23)

A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A
Reverse Opposite:
A C G T A T C G C T G A C G T A C T A G A C G T A T C G C T G A C A G T A T C G A G T C G T C A G C A T A C T G C T A G G T C A
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.747
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.6 +/- 9.7bp
Average Position of motif in Background57.1 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TYCATGCATCACTTCN
TTCACGCATGAGTT--
 A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TYCATGCATCACTTCN-
-----GTTTCACTTCCG
 A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TYCATGCATCACTTCN
GTCATGCHTGRCTGS-
 A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TYCATGCATCACTTCN
CGTCACGCATGACTGCA
 A C G T A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TYCATGCATCACTTCN
----ASTTTCACTTCC
 A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A
A C G T A C G T A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TYCATGCATCACTTCN
NGTCACGCTTGGCTGC-
 A C G T A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TYCATGCATCACTTCN-
-------ACCACTTGAA
 A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TYCATGCATCACTTCN
CGTCACGCATGACTGCA
 A C G T A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TYCATGCATCACTTCN-
--------CCACTTGAA
 A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TYCATGCATCACTTCN---
---------CACTTCCTCT
 A C G T A G T C A G T C C G T A C A G T A C T G A T G C G C T A A G C T A T G C C G T A G A T C A C G T A G C T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T