Information for 13-CTTTCTCATGCAACAC (Motif 19)

G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
Reverse Opposite:
A C T G A C G T A C T G A G C T A C G T C T A G A G T C G T C A C G A T A T C G C G T A C T A G C T G A C T G A C G T A A C T G
p-value:1e-9
log p-value:-2.260e+01
Information Content per bp:1.736
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.4 +/- 23.4bp
Average Position of motif in Background52.2 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTTTCTCATGCAACAC
CTTTGTTATGCAAAT-
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTCTCATGCAACAC
CATTGTTATGCAAAT-
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTCTCATGCAACAC
ANTTCTCAGGAANNN-
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTTTCTCATGCAACAC
----ATGATGCAAT--
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTTTCTCATGCAACAC
----MTGATGCAAT--
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTCATGCAACAC
ACTTCCTGNT-------
 A C G T G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTTCTCATGCAACAC
--TTCTNMGGAA----
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTCATGCAACAC
ACTTTCACTTTC-----
 A C G T G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTTTCTCATGCAACAC
HTTTCCCASG------
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTTTCTCATGCAACAC
---NATGTTGCAA---
 G T A C A C G T A G C T A G C T A G T C A C G T A T G C C G T A A C G T A C T G G A T C G T C A C T G A T G A C G T C A T G A C
A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T