Information for 6-TGCGGTTAAC (Motif 5)

G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C
Reverse Opposite:
C T A G A C G T A G C T G C T A T C G A A T G C G A T C T C A G A T G C C G T A
p-value:1e-12
log p-value:-2.826e+01
Information Content per bp:1.678
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.02%
Number of Background Sequences with motif650.6
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets48.7 +/- 25.4bp
Average Position of motif in Background49.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGTTAAC
TTGCGGTTT--
 A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGTTAAC
TTTGCGGTTT--
 A C G T A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGCGGTTAAC---
-ACCGTTAACGGT
 G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C A C G T A C G T A C G T
A C G T C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCGGTTAAC-------
AGCTGTTAACTAGCCGT
 G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGTTAAC
CTGTGGTTTN-
 A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGTTAAC
NNTGTGGTTT--
 A C G T A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCGGTTAAC------
CCTTAGTTAACTAAAAT
 A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGCGGTTAAC
GCTGTGGTTT--
 A C G T A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCGGTTAAC------
ACTTAGTTAACTAAAAA
 A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGTTAAC-----
NNNNCTGTTAACNNTNN
 A C G T A C G T G C A T A T C G A G T C C T A G T A C G A G C T C G A T T C G A T G C A G A T C A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A