Information for 15-GACTCCAACAGGG (Motif 17)

C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A T C G C T G A A C T G A G C T A G T C
p-value:1e-9
log p-value:-2.153e+01
Information Content per bp:1.828
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.2 +/- 25.9bp
Average Position of motif in Background29.0 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GACTCCAACAGGG--
--ATGCAACAGGTGG
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G A C G T A C G T
A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GACTCCAACAGGG----
--GAGCAACAGGTGGTT
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GACTCCAACAGGG
TACGAGACTCCTCTAAC-
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GACTCCAACAGGG---
-ATTCCCTGAGGGGAA
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GACTCCAACAGGG---
-ATTGCCTGAGGCGAA
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GACTCCAACAGGG---
------AACAGGAAGT
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GACTCCAACAGGG----
-----CAAGATGGCGGC
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GACTCCAACAGGG---
----GCCTCAGGGCAT
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GACTCCAACAGGG
-WTGSCCTSAGGS
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GACTCCAACAGGG
------CACAGN-
 C T A G C T G A G T A C A G C T A T G C A G T C G T C A C T G A T A G C C G T A C T A G A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T