Information for 7-GTCGTAAACG (Motif 12)

A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G
Reverse Opposite:
G T A C A C T G A C G T A C G T A C G T C T G A A T G C A C T G C G T A A G T C
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.842
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.8 +/- 21.8bp
Average Position of motif in Background32.6 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAACG--
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAACG---
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAACG---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAACG--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTCGTAAACG
GGTCGTAAAAT
 A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTCGTAAACG
GGTCGTAAAAA
 A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTCGTAAACG-
GGTCGTAAAATT
 A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAACG---
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTCGTAAACG--
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GTCGTAAACG
GTCGTAAAAA
 A C T G A C G T A G T C A T C G G A C T T G C A C G T A C G T A G T A C A C T G
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A