Information for 10-GADGGTKCAGCWG (Motif 11)

A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A C T A G T G A C A C G T A C T G G T A C G T C A T A G C A G T C G T A C C G A T A T G C
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.699
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif192.7
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets52.1 +/- 25.0bp
Average Position of motif in Background51.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.75
Offset:7
Orientation:reverse strand
Alignment:GADGGTKCAGCWG--
-------CAGCTGNT
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.74
Offset:6
Orientation:forward strand
Alignment:GADGGTKCAGCWG---
------NCAGCTGCTG
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.74
Offset:6
Orientation:reverse strand
Alignment:GADGGTKCAGCWG---
------HCAGCTGDTN
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GADGGTKCAGCWG--
---NNAGCAGCTGCT
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GADGGTKCAGCWG--
----NNGCAGCTGTC
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GADGGTKCAGCWG-----
-NNNNAGCAGCTGCTGAN
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GADGGTKCAGCWG--
----NNGCAGCTGTT
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:GADGGTKCAGCWG----
-----NVCAGCTGBBNN
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GADGGTKCAGCWG--
--NGNGACAGCTGCN
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.72
Offset:6
Orientation:reverse strand
Alignment:GADGGTKCAGCWG---
------GCAGCTGTNN
 A T C G G C T A C A T G A C T G A T C G C A G T C A T G A G T C G T C A A C T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T