Information for 5-GTTCTTGGCA (Motif 4)

T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A
Reverse Opposite:
C G A T A T C G A G T C G T A C T C G A C T G A T C A G G T C A G C T A A T G C
p-value:1e-17
log p-value:-3.933e+01
Information Content per bp:1.656
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif11.68%
Number of Background Sequences with motif2132.1
Percentage of Background Sequences with motif4.48%
Average Position of motif in Targets44.2 +/- 27.5bp
Average Position of motif in Background49.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GTTCTTGGCA--
--NNTTGGCANN
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GTTCTTGGCA-
---CTTGGCAA
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GTTCTTGGCA--
---NTTGGCANN
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.76
Offset:4
Orientation:forward strand
Alignment:GTTCTTGGCA
----TTGGCA
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTTCTTGGCA--
-TTCTTGGAAAN
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTTCTTGGCA-
CTTCTGGGAAA
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTTCTTGGCA-
--GGTTGGCAT
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTCTTGGCA-
NNNTTTCCTGGAAA
 A C G T A C G T A C G T T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTCTTGGCA---
NCTTCCNGGAAGNN
 A C G T T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T A C G T A C G T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTCTTGGCA--
TTTCTNAGAAAN
 T A C G C G A T C A G T A G T C G A C T A G C T C A T G T C A G T A G C G C T A A C G T A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T