Information for 7-GAACTSTGCAAKG (Motif 9)

C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T C A G T A C T G A G T C C G T A A T G C C G T A A C T G A C G T A G C T A G T C
p-value:1e-11
log p-value:-2.643e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 21.6bp
Average Position of motif in Background62.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAACTSTGCAAKG
-NATTGTGCAAT-
 C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAACTSTGCAAKG----
-AACACTGCAATTGTTC
 C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAACTSTGCAAKG
GAAAAAATTGCAAGG
 A C G T A C G T C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAACTSTGCAAKG
--ATTGCGCAAC-
 C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G
A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAACTSTGCAAKG--
---AGATGCAATCCC
 C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Sox11/MA0869.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAACTSTGCAAKG---
-AACACTGAAATTGTT
 C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAACTSTGCAAKG-
ANATTTTTGCAANTN
 A C G T C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAACTSTGCAAKG-
TGGACTTTGNNCTCN
 A C G T C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAACTSTGCAAKG-----
-NNNANTGCAGTGCNNTT
 C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAACTSTGCAAKG
---CTGTTCCTGG
 C T A G C T G A C G T A T A G C C G A T A T C G A C G T A C T G A G T C G C T A C G T A A C T G A C T G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G