Information for 13-CACTGTCACA (Motif 19)

A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.735e+01
Information Content per bp:1.960
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.0 +/- 23.2bp
Average Position of motif in Background41.7 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CACTGTCACA--
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CACTGTCACA
-CCTGTCAA-
 A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CACTGTCACA
--NTGTCAN-
 A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CACTGTCACA
-GCTGTCAA-
 A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACTGTCACA
CCAACTGCCA--
 A C G T A C G T A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACTGTCACA----
TCACTTTCACTTTCN
 A C G T A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACTGTCACA---
-ACTTTCACTTTC
 A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACTGTCACA
VGCTGWCAVB
 A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CACTGTCACA----
----GTCACATGAY
 A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACTGTCACA
--YTGWCADY
 A G T C C G T A A G T C A C G T C T A G A C G T A G T C C G T A A G T C C G T A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C