Information for 6-STTYWCTTARTGC (Motif 6)

A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T C G T A C G T A C T A G C G A T C T G A C G T A C G T A A T G C
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 29.5bp
Average Position of motif in Background42.7 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-STTYWCTTARTGC
TGTTTACTTT----
 A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-STTYWCTTARTGC
TGTTTACTTT----
 A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-STTYWCTTARTGC
TGTTTACTTAGG--
 A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----STTYWCTTARTGC
TCCATGTTTACTTTG---
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-STTYWCTTARTGC
TRTTTACTTW----
 A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T

Alx4/MA0853.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---STTYWCTTARTGC-
GNNNATTAATTAATGCG
 A C G T A C G T A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C A C G T
T C A G A T C G C A G T C G T A T C G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A G A C T C T A G A T G C A C T G

PH0002.1_Alx4/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---STTYWCTTARTGC-
GNNNATTAATTAATGCG
 A C G T A C G T A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C A C G T
T C A G A T C G C A G T C G T A T C G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A G A C T C T A G A T G C A C T G

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---STTYWCTTARTGC
TTTGTTTACTTA----
 A C G T A C G T A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T A C G T

PH0099.1_Lhx9/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---STTYWCTTARTGC-
NGTNATTAATTAATGNG
 A C G T A C G T A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C A C G T
T C A G T A C G A C G T C T A G G C T A G A C T G A C T T G C A C T G A G A C T A C G T C T G A C T G A G A C T C T A G T A C G C T A G

PH0095.1_Lhx5/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---STTYWCTTARTGC-
ANNATTTAATTAATTNN
 A C G T A C G T A C G T A T C G A C G T A C G T A G C T C G T A A G T C A C G T A C G T C G T A C T A G A C G T A C T G G T A C A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G