Information for 9-WGGCASTAKGYAA (Motif 9)

C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T C T A G A T G C G T C A A C G T C G T A A T C G A C G T A C T G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.5 +/- 20.6bp
Average Position of motif in Background55.8 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:WGGCASTAKGYAA-
TGGCACCATGCCAA
 C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WGGCASTAKGYAA-
CTTGGCANNNTGCCAA
 A C G T A C G T C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WGGCASTAKGYAA
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WGGCASTAKGYAA---
----AATATGCAAATT
 C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WGGCASTAKGYAA-
----RTTATGYAAB
 C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WGGCASTAKGYAA-
TGGCAGNCTGCCAG
 C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:WGGCASTAKGYAA--
------TATGCAAAT
 C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:WGGCASTAKGYAA--
------TATGCAAAT
 C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WGGCASTAKGYAA
TGGCAGTTGN---
 C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---WGGCASTAKGYAA
NNTTGGCANN------
 A C G T A C G T A C G T C G A T A C T G A C T G A G T C C G T A A T G C A C G T G T C A A C G T A T C G A G T C C G T A C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T