Information for 5-AGGWGGCAGTATT (Motif 2)

C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
Reverse Opposite:
C G T A G T C A A C G T C G T A A G T C A C G T A C T G G T A C A G T C G C T A A G T C A G T C G C A T
p-value:1e-21
log p-value:-5.026e+01
Information Content per bp:1.828
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.4 +/- 19.1bp
Average Position of motif in Background53.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGWGGCAGTATT
AGGTGTCA-----
 C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------AGGWGGCAGTATT
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGGWGGCAGTATT
---TGGCAGTTGN
 C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGGWGGCAGTATT
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGWGGCAGTATT
TTAAGAGGAAGTTA-
 A C G T A C G T C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGWGGCAGTATT---
NNNTGGCAGTTGGTNN
 C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGWGGCAGTATT
GGTTGGCAT----
 C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGWGGCAGTATT
AGGTGHCAGACA-
 C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGWGGCAGTATT
ACVAGGAAGT---
 C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGWGGCAGTATT
-AGAGGAAGTG--
 C G T A A C T G C T A G C G A T A C T G A C T G A G T C C G T A A C T G A C G T T G C A A C G T C G A T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T