Information for 8-AGCAAAGCTT (Motif 13)

G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T
Reverse Opposite:
G C T A C T G A C T A G A G T C A C G T A C G T A C G T A T C G A G T C C A G T
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.834
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif161.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets56.8 +/- 28.9bp
Average Position of motif in Background47.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:AGCAAAGCTT-
----AAGCTTG
 G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCAAAGCTT-
-GCAGTGATTT
 G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCAAAGCTT
ACATCAAAGG--
 A C G T A C G T G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAAGCTT
GGAACAAAGR--
 A C G T A C G T G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGCTT--
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAAGCTT
VRRACAAWGG--
 A C G T A C G T G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AGCAAAGCTT
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAAGCTT--
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCAAAGCTT----
GCAGCCAAGCGTGACN
 A C G T A C G T G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T A C G T A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCAAAGCTT-
TGCTGTGATTT
 G T C A A C T G A T G C G T C A T C G A T G C A A C T G G A T C A G C T C G A T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T