Information for 16-GTGGGAACTACAA (Motif 20)

A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A G T C A G T C A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.441e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 23.7bp
Average Position of motif in Background60.9 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGAACTACAA
CSTGGGAAAD----
 A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTGGGAACTACAA
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGGAACTACAA
GGCGGGAARN----
 A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------GTGGGAACTACAA
TGGCCANNNNNGGAACTGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAACTACAA
CWGGCGGGAA------
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGGGAACTACAA-
----AAACCACANN
 A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGGGAACTACAA
--TGGAACAGMA-
 A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGAACTACAA
AATGGAAAAT----
 A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGGGAACTACAA
-TGGGGCCCAC--
 A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GTGGGAACTACAA
TGCGGAGTGGGACTGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C G T C G T A A G T C C G T A C G T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T