Information for 5-MAGMKGGCTGGWC (Motif 16)

G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C C G T A A C T G A T G C A G T C G T A C A C T G A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 29.2bp
Average Position of motif in Background48.1 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--MAGMKGGCTGGWC
AACAGATGGC-----
 A C G T A C G T G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MAGMKGGCTGGWC-
--CGTGGGTGGTCC
 G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C A C G T
A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--MAGMKGGCTGGWC
GGGNGGGGGCGGGGC
 A C G T A C G T G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:MAGMKGGCTGGWC
-----NGCTN---
 G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MAGMKGGCTGGWC
CAAGATGGCGGC--
 A C G T G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MAGMKGGCTGGWC---
NNTNNTGTCTGGNNTNG
 A C G T G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:MAGMKGGCTGGWC
---CTGTCTGG--
 G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MAGMKGGCTGGWC
CAAGATGGCGGC--
 A C G T G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:MAGMKGGCTGGWC
---TWGTCTGV--
 G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----MAGMKGGCTGGWC
VNAVCAGCTGGC-----
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G G T A C A C T G A C T G A T C G A G T C A C G T A C T G A C T G C G A T A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T