Information for 11-CTTCTGACKGTTCCCY (Motif 15)

A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
Reverse Opposite:
C T A G A C T G C T A G C T A G C G T A C T G A T G A C T G A C A T C G C A G T A G T C C G T A A C T G G T C A C G T A A C T G
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.733
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.2 +/- 14.9bp
Average Position of motif in Background38.6 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCTGACKGTTCCCY
GCTTCC-----------
 A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTTCTGACKGTTCCCY
CCCCCTGCTGTG--------
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTTCTGACKGTTCCCY
ANCAGCTG----------
 A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTTCTGACKGTTCCCY
AATTTGCTGAC--------
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTTCTGACKGTTCCCY
-TGCTGACTCA-----
 A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTCTGACKGTTCCCY-
CAKCTGKYCYYTTYCCC
 A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTTCTGACKGTTCCCY
AAAATGCTGACT-------
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTTCTGACKGTTCCCY
TNTCCTGCTGTGNNG-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTGACKGTTCCCY
NVCAGCTGBBNN------
 A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CTTCTGACKGTTCCCY
GGCCYCCTGCTGDGH-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A T A G C A C T G A C T G A G C T G A C T A G T C A G T C G T A C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T