Information for 4-TGAKACTWYACAT (Motif 13)

A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T A C T G A C G T T C A G C G T A C G T A A C T G A C G T G T C A A C G T G T A C C G T A
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.7 +/- 23.1bp
Average Position of motif in Background61.8 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGAKACTWYACAT
NTTGATACATT----
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGAKACTWYACAT
ACTGAAACCA-----
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGAKACTWYACAT
ANANNTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGAKACTWYACAT
ANNNATGATACCCCATC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGAKACTWYACAT
AATNTTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGAKACTWYACAT--
TGACANARRCCAGRC
 A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGAKACTWYACAT-
--BTVATTWGCATA
 A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGAKACTWYACAT-
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

SOX8/MA0868.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGAKACTWYACAT----
-AACACTGCACATTGTT
 A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGAKACTWYACAT
ATAAATGACACCTATCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A C G T C G A T A G T C C G T A A G T C C G T A A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T