Information for 1-CTTGAAATCT (Motif 8)

G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
Reverse Opposite:
T G C A T A C G G T C A G C A T G C A T A C G T T A G C G C T A T G C A C A T G
p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.664
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif10.58%
Number of Background Sequences with motif2355.0
Percentage of Background Sequences with motif4.77%
Average Position of motif in Targets44.8 +/- 26.0bp
Average Position of motif in Background50.1 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTGAAATCT
TTTGAAACCG
 G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTGAAATCT
NATTCAAAT--
 A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAATCT
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAATCT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAAATCT-----
NNNCTGATATCTCNNNN
 A C G T A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAATCT
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAAATCT----
GTATTGACAGCTNNTT
 A C G T A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTTGAAATCT
ACTGAAACCA
 G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CTTGAAATCT
GCTGACCTTGAACTN-
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAAATCT----
NTATTGACAGCTNNTT
 A C G T A C G T G T A C A C G T C G A T A T C G T G C A C G T A C G T A C A G T A T G C A C G T A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T