Information for 11-TGYATGCATGCAC (Motif 15)

G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C
Reverse Opposite:
C A T G A G C T A C T G A G T C C T G A G A C T C T A G T A G C C G T A G A C T C T A G A G T C C T G A
p-value:1e-3
log p-value:-8.434e+00
Information Content per bp:1.692
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif694.2
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets47.4 +/- 24.5bp
Average Position of motif in Background51.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGYATGCATGCAC
-GTGCGCATGCGC
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C
A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGYATGCATGCAC
---ATGMATATDC
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGYATGCATGCAC---
-ATTTGCATACAATGG
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGYATGCATGCAC
---TBGCACGCAA
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGYATGCATGCAC-
GACCACATTCATACAAT
 A C G T A C G T A C G T G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGYATGCATGCAC-----
-NTNTATGTGCACATNNN
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGYATGCATGCAC---
NNCATTCATTCATNNN
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGYATGCATGCAC--
AAAATATGCATAATAAA
 A C G T A C G T G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGYATGCATGCAC
-CTGCGCATGCGC
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGYATGCATGCAC--
-ACATTCATGACACG
 G A C T T A C G A G T C C T G A G A C T A C T G A G T C C G T A G A C T C T A G G T A C C T G A G T A C A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G