Information for 7-CCCAAGACGCTGA (Motif 14)

A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C T G A C T G C T A G
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 15.3bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mafb/MA0117.2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCAAGACGCTGA--
---AAAATGCTGACT
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCAAGACGCTGA
--CCAGACRSVB-
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCAAGACGCTGA
--CCAGACAG---
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCAAGACGCTGA-
---AATTTGCTGAC
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCCAAGACGCTGA
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCCAAGACGCTGA
-------NGCTN-
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCCAAGACGCTGA-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCCAAGACGCTGA----
--AAAWWTGCTGACWWD
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCCAAGACGCTGA----
-------TGCTGACTCA
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCCAAGACGCTGA-----
---AAANTGCTGACTNAG
 A G T C A G T C A G T C G T C A C G T A A C T G C G T A A G T C A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G