Information for 3-AAAGCCAGGGAAG (Motif 7)

C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C G A T C A G T C A C G T A C T G A C T G A G T C A C G T A C G T A C G T
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.4 +/- 13.3bp
Average Position of motif in Background18.6 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAAGCCAGGGAAG
-ATGCCAGACN--
 C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCAGGGAAG
AAAAGTCAA-----
 A C G T C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAAGCCAGGGAAG
--TGCCAA-----
 C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAGCCAGGGAAG
CGTGCCAAG----
 C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AAAGCCAGGGAAG
--WDNCTGGGCA-
 C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AAAGCCAGGGAAG-
--------NGAAGC
 C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCAGGGAAG
ACTAGCCAATCA--
 A C G T C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCAGGGAAG
CAAGGHCANV----
 A C G T C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------AAAGCCAGGGAAG
AAGTTCAAGGTCAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAAGCCAGGGAAG
-CAGCC-------
 C G T A C G T A C G T A A C T G A G T C A G T C C G T A A C T G C A T G A C T G G T C A G T C A A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T