Information for 12-TYCTTTTTKT (Motif 39)

A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T
Reverse Opposite:
T G C A G T C A C T G A C T G A C G T A C G T A T G C A C T A G C T A G T G C A
p-value:1e-2
log p-value:-6.360e+00
Information Content per bp:1.728
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif162.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets37.8 +/- 24.5bp
Average Position of motif in Background48.5 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TYCTTTTTKT----
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TYCTTTTTKT------
--TTTTTTTTCNNGTN
 A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TYCTTTTTKT----
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TYCTTTTTKT----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TYCTTTTTKT----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TYCTTTTTKT-
-CCTTTGTTTT
 A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TYCTTTTTKT
-CCWTTGTY-
 A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TYCTTTTTKT----
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TYCTTTTTKT-----
TTCTATTTTTAGNNN
 A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TYCTTTTTKT
-CCTTTGTT-
 A C G T A G T C A G T C A C G T C G A T A C G T A G C T A G C T A C G T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T