Information for 11-CATCATCTGACCT (Motif 27)

A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T
Reverse Opposite:
T G C A A C T G C T A G A C G T A T G C C G T A T A C G T G C A C A G T A T C G C G T A C G A T A C T G
p-value:1e-6
log p-value:-1.547e+01
Information Content per bp:1.685
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif473.9
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets58.0 +/- 26.6bp
Average Position of motif in Background49.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CATCATCTGACCT---
---CNNTTGACCTTTG
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:CATCATCTGACCT--
-------TGACCTYA
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CATCATCTGACCT-
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CATCATCTGACCT---
------CTGACCTTTG
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CATCATCTGACCT
-------TGACCT
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CATCATCTGACCT-
------GTGACCTT
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CATCATCTGACCT----
-------TGACCTTGAT
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CATCATCTGACCT--
-------TGACCYCT
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CATCATCTGACCT---
------NTGACCTTGA
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

USF1/MA0093.2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATCATCTGACCT
-GCCACGTGACC-
 A G T C C G T A C G A T A T G C G T C A A C G T A T G C C G A T A T C G T G C A A G T C A G T C A C G T
A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T