Information for 5-CCASGGCGCG (Motif 20)

A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G
Reverse Opposite:
A G T C A T C G A G T C C T A G G T A C A T G C T A C G C A G T A C T G T A C G
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.477
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif9.49%
Number of Background Sequences with motif1937.0
Percentage of Background Sequences with motif4.09%
Average Position of motif in Targets50.5 +/- 24.8bp
Average Position of motif in Background50.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCASGGCGCG--
----GGCGCGCT
 A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCASGGCGCG----
ATAAGGGCGCGCGAT
 A C G T A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCASGGCGCG----
ATAAAGGCGCGCGAT
 A C G T A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCASGGCGCG-
ATGCCCGGGCATGT
 A C G T A C G T A C G T A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCASGGCGCG--
NNGCNCTGCGCGGC
 A C G T A C G T A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCASGGCGCG---
-BTKGGCGGGAAA
 A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T A C G T A C G T
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCASGGCGCG
WDNCTGGGCA--
 A C G T A C G T A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCASGGCGCG----
----GGCGGGAAAH
 A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCASGGCGCG
NGTTGCCATGGCAA-
 A C G T A C G T A C G T A C G T A C G T A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCASGGCGCG----
---GGGCGGGAAGG
 A T G C T G A C G T C A A T G C T A C G C A T G G A T C T C A G T A G C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G