Information for 13-GCTCTGGACATTCTCC (Motif 19)

A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G C T G A C T G A A C G T A C T G A C G T A T G C A G T C C G T A A C T G C G T A A C T G A G T C
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 15.1bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTCTGGACATTCTCC
-GYCTGGYYTNTGTCA
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCTCTGGACATTCTCC
-----GGAAATTCCC-
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

SOX8/MA0868.1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGGACATTCTCC
AACACTGCACATTGTT-
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCTCTGGACATTCTCC--
--ATTGGACTTTGACCCC
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCTCTGGACATTCTCC
CAGATGTGCACATACGT-
 A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCTCTGGACATTCTCC
------CACATTCCAT
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GCTCTGGACATTCTCC-
-----GGGGATTCCCCC
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCTCTGGACATTCTCC
WDNCTGGGCA------
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:forward strand
Alignment:GCTCTGGACATTCTCC
------CACATTCCAT
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GCTCTGGACATTCTCC
-----GGAAATTCCC-
 A C T G A G T C A C G T A G T C A C G T A C T G T A C G G T C A A G T C C G T A A G C T A G C T A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T