Information for 7-GCTKKGCCTKGSC (Motif 18)

A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C G T A C C T G A A C T G A T C G G T A C G T A C G T A C C T G A A T C G G T A C
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.764
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif7.28%
Number of Background Sequences with motif1248.0
Percentage of Background Sequences with motif2.63%
Average Position of motif in Targets48.4 +/- 25.6bp
Average Position of motif in Background48.6 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTKKGCCTKGSC
-BNTGDCCTTG--
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTKKGCCTKGSC
-CTGTTCCTGG--
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCTKKGCCTKGSC-
----WDNCTGGGCA
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCTKKGCCTKGSC
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTKKGCCTKGSC
---TGACCTTGAN
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTKKGCCTKGSC----
---ATGCCCGGGCATGT
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTKKGCCTKGSC
-CTAGGCCT----
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTKKGCCTKGSC
---TGACCTTGAV
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTKKGCCTKGSC
-CNAGGCCT----
 A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCTKKGCCTKGSC--
RRCATGYCHGGACWTGYYYN
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G A C T A C T G A C T G C A T G A T G C A G T C G A C T A C T G A C T G A T G C A G T C A C G T A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T