Information for 5-GGKGCCAGYAAAG (Motif 17)

C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T C T A G A G T C A C G T A C T G A T C G A T G C G T A C A G T C A G T C
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.4 +/- 10.3bp
Average Position of motif in Background55.1 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGKGCCAGYAAAG
CGTGCCAAG----
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGKGCCAGYAAAG
--TGCCAA-----
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGKGCCAGYAAAG---
AGAGCCATAAAATTCG
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGKGCCAGYAAAG
AGGTGNCAGACAG-
 A C G T C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGKGCCAGYAAAG
AGGTGHCAGACA--
 A C G T C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGKGCCAGYAAAG----
ACGGCCATAAAATTAAT
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGKGCCAGYAAAG
---NACAGGAAAT
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGKGCCAGYAAAG-
----CCAATAAAAC
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGKGCCAGYAAAG
TGAGTCAGCA---
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGKGCCAGYAAAG
-ATGCCAACC---
 C T A G A C T G A C T G T A C G A T G C A G T C C G T A A C T G A G T C C G T A C G T A C G T A A C T G
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T