Information for 10-TGGYCTCCTTGCCGYC (Motif 15)

A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
Reverse Opposite:
A C T G C T G A A G T C C T A G A T C G A T G C T C G A T C G A A C T G A T C G C G T A A T C G T C G A A G T C A G T C T C G A
p-value:1e-9
log p-value:-2.270e+01
Information Content per bp:1.684
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.6 +/- 26.1bp
Average Position of motif in Background53.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGYCTCCTTGCCGYC
-BNTGDCCTTG-----
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGYCTCCTTGCCGYC
----NNACTTGCCTT-
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGGYCTCCTTGCCGYC
---TGACCTTGACCT-
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGGYCTCCTTGCCGYC
---TGACCTTGAV---
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGGYCTCCTTGCCGYC
---TGACCTTGAN---
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGYCTCCTTGCCGYC
-GCTGACCTTGAACTN
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGYCTCCTTGCCGYC
--NTGACCTTGA----
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGGYCTCCTTGCCGYC-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGGYCTCCTTGCCGYC
---TGACCTTGACCT-
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGYCTCCTTGCCGYC
AGGTCACCCTGACCT-
 A C G T A C T G A C T G A G C T T A G C G A C T A T G C A G T C A C G T A G C T A T C G A T G C A G T C T C A G G A C T T G A C
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T